| Database | Family | Genus | Located at |
| Astrovirus | Astroviridae | all | IAH |
| Calicivirus | Caliciviridae | all | IAH |
| Caulimovirus | Caulimoviridae | Donald Danforth Plant Science Center | |
| Classical swine fever virus | Flaviviridae | Pestivirus | Community Reference Laboratory for Classical Swine Fever |
| Dicistrovirus | Dicistroviridae | all | IAH |
| dsRNA viruses | Reoviridae | IAH | |
| Foot-and-mouth disease virus | Picornaviridae | Aphthovirus | IAH |
| Geminivirus | Geminiviridae | Donald Danforth Plant Science Center | |
| Hepatitis B virus | Hepadnaviridae | National Institute of Genetics, Shizuoka, Japan | |
| Hepatitis C virus | Flaviviridae | Hepacivirus | National Institute of Genetics, Shizuoka, Japan |
| Hepatitis E virus | Hepeviridae | National Institute of Genetics, Shizuoka, Japan | |
| HIV | Retroviridae | Lentivirus | Los Alamos National Laboratory |
| Iflaviruses | Iflaviridae | all | IAH |
| Influenza viruses | Orthomyxoviridae | Los Alamos National Laboratory | |
| Invertebrate picorna-like | various | IAH | |
| Oral pathogens | various | Los Alamos National Laboratory | |
| Picornavirus | Picornaviridae | all | IAH |
| Potyvirus | Potyviridae | Donald Danforth Plant Science Center | |
| Sequivirus | Sequiviridae | all | IAH |
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